Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVEKLRRKIMQSKTLFLLGLCTIFSTTVSALPLDSKGAKQRLSQAAKQKVFQGKIDLDALVSNDSNDLIVEYNIPSSSVSSGLERRSYIATNKKNLQTRFSRAGGVQVLRDYNNLPLAFYRISNREALIALLNDPNVKAVYPNRINRTTTTESLPLINQPQANTNGFTGEGSSVAVLDTGVNYLHSDFGCTAVNTPSSTCRVVYSFDSAP-DDGTLDDDGHGSNVSAIVS---------KVATKTKIIGIDVFRKVRSQGKWVSTAYDSDILAGINWAVNNAQTYNIKAVNLSLGVPGVKYTSECSDSSYGTAFANARAAGVVPVVASGNDAFP---DGISSPACVAGAVRVGAVYDSNIGGVSWGNPVKCSDPTTAADKVACFSNGGSLVTLLAPGAMITAG-----GYTMGGTSQATPHVAGAIALLRANSVSPTESIDQTISRLKATGKPITDSRTGLVFPRIDLLAATNGLTVN
1R0R Chain:E ((5-274))-------------------------------------------------------------------------------------------------------------------------------------------------------PYGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVG------------GASFVAGEAYNTDGNGHGTHVAGTVAALDNTTGVLGVAPSVSLYAVKVLNSS-------GSGSYSGIVSGIEWATTN----GMDVINMSLGGASG-------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS--------------------NSNRASFSSVGAELEVMAPGAGVYSTYPTNTYATLNGTSMASPHVAGAAALILSKH--PNLSASQVRNRLSSTATYLGS-SFYYGKGLINVEAAAQ-----


General information:
TITO was launched using:
RESULT:

Template: 1R0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1778 6527 3.67 25.90
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain E : 0.65

3D Compatibility (PKB) : 3.67
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_1R0R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R0R-query.scw
PDB file : Tito_Scwrl_1R0R.pdb: