Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFVAELIGTFMLVFVGTGAVVFGNGLDGLGHLGIAFAFGLAIVVAAYSIGTVSGAHLNPAVSIAMFVNKRLSSSELVNYILGQVVGAFIASGAVFFLLANSGMSTASLGENALANGVTVFGGFLFEVIATFLFVLVIMTVTSESKGN-GAIAGLVIGLSLMAMILVGLKITGLSVNPARSLAPAVLVGGAALQQVWIFILAPIAGGVLAALVAKNFLGTEE
3M9I Chain:A ((4-220))WRAIFAEFFATLFYVFFGLGASLRWAPG-PLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVR--GNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR--NFTNHWVYWVGPVIGAGLGSLLYDFLLFPR-


General information:
TITO was launched using:
RESULT:

Template: 3M9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1244 -181509 -145.91 -840.32
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -145.91
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_3M9I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M9I-query.scw
PDB file : Tito_Scwrl_3M9I.pdb: