Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMENIMAYITLRDVQLAFGG---PALLDGANFNLERGERVCLIGRNGEGKSTLLKLIEGSLLPDSGEVSVQNG-----------LTVSMLAQDVPMSSGKVADNVAEGAGEAAAVLKAYHEASDACVLGDMEACDRMGSLQHKLDQLDGWALENKVNTILGKME--LDP--NADLADLSGGRKRRVLLARALLTQPDVLLLDEPTNHLDVESIEWLEKFLLDQ-NNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGNYSRYLDLKAQQLE------AEE-KQNALFEK-----------------------------------KL----A--------E-------------------------------------------------EEAWIRQGIKA------RR-------------------------------------------------------------TRNEGR---------------------VR----------ALKAL-REESKARRFQQ-------------------------------GKVN----------------------------------------M-GV-QE---------AQRSGKLVFDIEHLSVSYDG---QTLIRDFSAIVMRGDRIGLVGDNGVGKTTLIKAILGEVQH-EGVVKTGTQ-----------LEIAYFDQLRNQLDLEKSVSENVSEGSDFVDVN--GQRR-----HILSYLQDFLFS-PERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLELLEEMLSEYK--GTLLLISHDRAFMDNVVTSTWVFDGKGGIAEYIGGYQDYLIQRPNERVVDQKGDVKKAQAKAEAEKNAAQTNVKKVKLSYKDQRELEQLPAEIEKLENEQAELSDKLADGSWFVTDADAATKASQRLAEIEELLLEKLERWDELEQKSKGN
5KO2 Chain:B ((386-1224))-----GNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVT--MDEIEKAVKE----------------------------ANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDQATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRN-ADVIAGFDGGVIV-EQGNHDELMREKGIYFKLVMTQT---DVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPIL--FDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDQATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQN-ADLIVVIQN-GKVKE-HGTHQQLLA--------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5KO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1898 78674 41.45 162.21
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 41.45
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_5KO2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KO2-query.scw
PDB file : Tito_Scwrl_5KO2.pdb: