Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSGSTITPWVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIR---EGLCQLTPAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQAFAQSK 4YWI Chain:B ((6-246)) --------FVAANWKCNGTLESIKSLTNSFNNL----DFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTG---IQNVSKF-GNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLI--DNFDN-VILVYEPVWAIG--KTATPEQAQLVHKEIRKIVKDTCGEKQA-NQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASL-KESFVDIIKS-----

General information: TITO was launched using: RESULT: Template: 4YWI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1216 -93374 -76.79 -395.65 target 2D structure prediction score : 0.60 Monomeric hydrophicity matching model chain B : 0.80 3D Compatibility (PKB) : -76.79 2D Compatibility (Sec. Struct. Predict.) : 0.60 1D Compatibility (Hydrophobicity) : 0.80 QMean score : 0.544

(partial model without unconserved sides chains): PDB file : Tito_4YWI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YWI-query.scw PDB file : Tito_Scwrl_4YWI.pdb: