Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDYTEKQVLQGKAVLFLGAGASYNCTDREKKRIGFTGNELLQKINEEFLGNTPNHLTLDFASTMAIQKAGRENFDLFIKELVCDFDPTNEHKLLSEFK----WKAIFTTNYDEAIEKAYRENKSALQKIEKIISDNDSLQKVVVNPDKLPIIKIHGCISRPNDTRTPLVISCSDYRRHQENRSSLYQY----LKECLTSDLVIFYGYGLGDNNIVGILDDLEKEGVNRTRHIWLDPFMDEMYKDYWESKNLLCKVNNLYDFLSEIKSKKDS-NILSLNSFLK------NDSVISKLIPSNDRPSNELETYLLKQLLYVEMNDEIKRESDNYNNDIFYRGNAHGFSWVAKNLDFQRAIERTLEVELFENFEISNQLFNFLIINGYAGSGKSVLLKRLAWNGVSKFNGNCFYLSEGATLNTKLIFELIKLIKEPIILFVDNILEHQTEILEIKNFSIKDCSKIMIVGAARSNEWNNSENILDKLNPNFFSLKDLNDFEVKNLVNKLKEFKAEGSLKELSDI-DKYKFIKEKSNNQLLVTLLEATHYGQEFSEIIKDEYEGIYDRSAKDLYLSICCFHRHGLELRAGMIKRLSGINFEQFKEKFLQPLELLVTSYYSYRVNDIVYTTRHSYIAQHVFKQAFLSEMDKAQQLIKIIRYLNIGFDTDSKALDFILKGRILAEEFNDKDLAHSIFNIAQDIGVNNAFILHQRAIFEINHQNPNYELALDYLKRINSSDGYYDMRTVEHTKANAYRKIALNSSSKQDKIKYRNLSLKLLNDNIRTSNRTSMPYHTKGLVLLDEIKDCDNENDLVDIIKDFENNLSAGFKKFPYDESLTVLEHDFSDEIDNSPRAIEKIKEALRKNSDNIYIVQRYAKFYIKKNDFLEARTCMLNFLRNDVNNRAINYLMAYSYIKENESLYFQNAIKYLKKCYSPRDSNYEPKFLHACLEYIYQSEEKALKIFTDLNQSNVSPKIKNKPTHMIRDSEGNERFFDAIIVTINDQFGFVKTSKYAENIYVHKSTISNEEDWEALRPGDPLKISIWFSFRGPRAKTAIIL
4M59 Chain:A ((6-714))---------------------------------------------------------PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAA--DASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVE------PDGFTASTVIAACSRDGL---VDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMAS-PNAFTYNTVMTAYGNVGKVDEALALFDQMKK----TGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPN------RVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELS-------RDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPC------ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEV---------------YGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKAR-GYNPDLVIFNSMLSIYAKN-------GMYSKATEVFDSIK--RSGLSPDLITYNSLMD---MYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVA-DGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3092 42028 13.59 62.63
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 13.59
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_4M59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M59-query.scw
PDB file : Tito_Scwrl_4M59.pdb: