Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIIRVKNAEEGGKKAFEIIKEGMN-KGAKVLGLATGSTPVTLYKEMTS----SDLDFSEMTSVNLDEYVGLGGSDEQSYRHFMDVQLFDKK--PFKETFVPDGKAEDLEAACKKYDQ-IIDAHPIDIQILGIGQNGHIGFNEPGASFDGTTSVVDLTESTINANKRFFDKAEDVPTKAVSMGIGSIMKSKEIVLMAFGESKADAIKGMIEGPVTNHLPASVLQNHDNVVVIIDEEAASKL
2BKX Chain:B ((1-241))MKVMECQTYEELSQIAARITADTIKEKPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLR


General information:
TITO was launched using:
RESULT:

Template: 2BKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1315 39381 29.95 169.02
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : 29.95
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.639

(partial model without unconserved sides chains):
PDB file : Tito_2BKX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BKX-query.scw
PDB file : Tito_Scwrl_2BKX.pdb: