Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVEKLRRKIMQSKTLFLLGLCTIFSTTVSALPLDSKGAKQRLSQAAKQKVFQGKIDLDALVSNDSNDLIVEYNIPSSSVSSGLERRSYIATNKKNLQTRFSRAGGVQVLRDYNNLPLAFYRISNREALIALLNDPNVKAVYPNRINRTTTTESLPLINQPQANTNGFTGEGSSVAVLDTGVNYLHSDFGCTAVNTPSSTCRVVYSFDSAPD-DGTLDDDGHGSNVSAIV---------SKVATKTKIIGIDVFRKVRSQGKWVSTAYDSDILAGINWAVNNAQTYNIKAVNLSLGVPGVKYTSECSDSSYGTAFANARAAGVVPVVASGNDAFPDGISSPACVAGAVRVGAVYDSNIGGVSWGNPVKCSDPTTAADKVACFSNGGSLVTLLAPGAMITAG-----GYTMGGTSQATPHVAGAIALLRANSVSPTESIDQTISRLKATGKPITDSRTGLVFPRIDLLAATNGLTVN
1GCI Chain:A ((5-269))-------------------------------------------------------------------------------------------------------------------------------------------------------PWGISRVQAPAAHNRGLTGSGVKVAVLDTGIS-THPDLNIR------------GGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGAS-------GSGSVSSIAQGLEWAGNN----GMHVANLSLGSPSP-------SATLEQAVNSATSRGVLVVAASGNSGA-GSISYPARYANAMAVGATDQ--------------------NNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAGAAALVKQKN--PSWSNVQIRNHLKNTATSLG-STNLYGSGLVNAEAATR-----


General information:
TITO was launched using:
RESULT:

Template: 1GCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1738 6943 3.99 27.77
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 3.99
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_1GCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GCI-query.scw
PDB file : Tito_Scwrl_1GCI.pdb: