Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNVVVLGTQWGDEGKGKIVDLLTDQAAAVVRYQGGHNAGHTLVVG-GKKTVLHLIPSGILREKVLCLIGNGVVLSPAALIEEMGILEAEGVPVKERLRISPNCPLILPNHIALDQAREKKRGNAKIGTTGRGIGPAYEDKVARRAVRVADLVRGGAALEEKLTEMLELHNFQLTQFYGVEAVKFEDVLALCNQWREVLAPLVIDVTKVLHDYRKEGKAVMFEGAQGSLLDIDHGTYPYVTSSNTTAGGVSSGSGMGPLHLDYVLGITKAYTTRVGAGPFPTELVYDAASDSGDPIGKHLGTVGHEFGASTGRQRRCGWFDAEILRRSVDVNSLSGICLTKLDVLDGLEEVKICVGYEN-TDSGC-VGSSDAVSFECLKPIYETMPGWSESTVGLTSIDQLPANALAYVKRIEQLIECPIDIVSTGPDRAETIILRHPFSA
1DJ3 Chain:B ((17-442))LSNVSGVLGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTLCVVGNGAVIHVPGFFGEIDGLQSNGVSCDGRILVSDRAHLLFDLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHM-DTFGDKLDVLFEDAAARFEGF-KYSKGMLKEEVERYKKFAERLEPFIADTVHVLNESIRQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTELL--------GEEGDVLRKAGMEFGTTTGRPRRCGWLDIVALKYCCDINGFSSLNLTKLDVLSGLPEIKLGVSYNQMDGEKLQSFPGDLDTLEQVQVNYEVLPGWDSDISSVRSYSELPQAARRYVERIEELAGVPVHYIGVGPGRDALIYK------


General information:
TITO was launched using:
RESULT:

Template: 1DJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2411 -55528 -23.03 -131.27
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -23.03
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_1DJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DJ3-query.scw
PDB file : Tito_Scwrl_1DJ3.pdb: