Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDYTEKQVLQGKAVLFLGAGASYNCTDREKKRIGFTGNELLQKINEEFLGNTPNHLTLDFASTMAIQKAGRENFDLFIKELVCDFDPTNEHKLLSEFKWKAIFTTNYDEAIEKAYRENKSALQKIEKIISDNDSLQK-VVVNPDKLPIIKIHGCISRPNDTRTPLVISCSDYRRHQENRSSLYQYLKECLTSDLVIFYGYGLGDNNIVGILDDLEKEGVNRTRHIWLDPFMDEMYKDYWESKNLLCKVNNLYDFLSEIKSKKDSNILSLNSFLKNDSVISKLIPSNDRPSNELETYLLKQLLYVEMNDEIKRESDNYNNDIFYRGNAHGFSWVAKNLDFQRAI-ERTLEVELFENFEISNQLFNFLIINGYAGSGKSVLLKRLAWNGVSKFNGNCFYLSEGATLNTKLIFELIKLIKEPIILFVDNILEHQTEILEIKNFSIKDCSKIMIVGAARSNEWNNSENILDKLNPNFFSLKDLNDFEVKNLVNKLKEFKAEGSLKELSDIDKYKFIKEKSNNQLLVTLLEATHYGQEFSEIIKDEYEGIYDRSAKDLYLSICCFHRHGLELRAGMIKRLSGINFEQFKEKFLQPLELLVTSYYSYRVNDIVYTTRHSYIAQHVFKQAFLSEMDKAQQLIKIIRYLNIGFDTDSKALDFILKGRILAEEFNDKDLAHSIFNIAQDIGVNNAFILHQRAIFEINHQNPNYELALDYLKRINSSDGYYDMRTVEHTKANAYRKIALNSSSKQDKIKYRNLSLKLLNDNIRTSNRTSMPYHTKGLVLLDEIKDCDNENDLVDIIKDFENNLSAGFKKFPYDESLTVLEHDFSDEIDNSPRAIEKIKEALRKNSDNIYIVQRYAKFYIKKNDFLEARTCMLNFLRNDVNNRAINYLMAYSYIKENESLYFQ---------NAIKYLKKCYSPRDSNYEPKFLHACLEYIYQSEEKALKIFTDLNQSNVS-PKIKNKPTHMIRDSEGNERFFDAIIVTINDQFGFVKTSKYAENIYVHKSTISNEEDWEALRPGDPLKISIWFSFRGPRAKTAIIL---------
5IRL Chain:A ((5-830))--EAAACKKYMSKLRTIVAAQSRFL-------------NLCLEDIY------TENTLEVRTAA-------------LGLEELFSDAD--------------TVLVVG------EAGSGKSTLLQQVHLLWATGQDFQEFLFVFPFSCRQLQ---CVARPLSVMTLLFEHCCWPDV---GQQDVFQFLLDHPDRILLTFDG-----------FDEFKFKFTDHERHC---------------SPTDPTSVQTLLFNLLQ------------GNLLKN---ARKVLTS--RP------------------DAVSAFLRKYVRTEFNL---KGFSEEGIELYLRKCHREPGVADRLIHLLQTTSALHGLCHLPVFSWMVSKCHQELLLQDGGSP-----------------------KTTTDMYLLILQHFLRHAS-LLQGRLPTLLRLGQLALWGLGMCCYVFSAQQLQAAQV-------DPDDISLGFLVQAPLEFLH----------------------------ITFQCFLAAFYLVLSTD---VPTASLRYLF---------NCSTVAALLQK----------------------------------TEPHNLQITAAFLAGLLS--REHRDLLAACQ----------ASERSLLRRRACARWCLARSLHKHFRSIPA----MPGFLWLIRSLYEMQE----ERLAQEAVRGLNVEHLKLTFCGVGPAECAALAFVLRHLR--------RPVALQLDHNSV-------------GDIGVEQLLPCLGA---CKALYLRDNNIS---------------DRGICKLIEHALHCEQLQKLALFNNKLTDGCAHSVAQLLACKQNFL-----ALRLGNNHITAEGAQVLAEG--LRDNSSLQFLGFWGNKVGDKGAQALAEALSDHQS---LKWLSLVGNNI---GSVGAQALASMLEKNVALEELCLAANHL--QDAGVCSLAEGL-----KRNSSLKVLKLSNNCI---TFVGAEALLQALASNDTI-LEVWLRGNPFSPEEMEALSHRDSRLLL


General information:
TITO was launched using:
RESULT:

Template: 5IRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4149 13625 3.28 18.84
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 3.28
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_5IRL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IRL-query.scw
PDB file : Tito_Scwrl_5IRL.pdb: