Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGFEKRAQEKKKEILQAAFDLMNTDIGTAGVTMDKVAENAQVSKATIFKYFGSKEGLIYEVFFAFMNDLGQEAKALIAENLPFEETLIAMSENKIRY-LNRVNKQFYIDLMTYYTKKEKKEFSDAMDAYTQESFSIMLDLFHRGRKEGKVDLKYSDEFLILYFQAMVEGISKPEI----YAKLLPYTAEWTEVLIKGIAPKKK
1VI0 Chain:B ((8-195))---------PKYMQIIDAAVEVIAE-NGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAGD--HNLAIVTQLELRQSNLELRQKI-NEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQMIFGTIDETVTTWVMNDQKYDLVALSNSVLELLVSGIHN---


General information:
TITO was launched using:
RESULT:

Template: 1VI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 726 -60968 -83.98 -333.16
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -83.98
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1VI0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VI0-query.scw
PDB file : Tito_Scwrl_1VI0.pdb: