Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPELPEVETVCRGLEKLIIGKKISSIEIRYPK-MIKT-DLEEFQRELPSQIIESMGRRGKYLLFYLT-DKVLISHLRMEGKYFYYPDQ-------------GPERKHAHVFFHFEDGGTLVYEDVRKFGTMELLVPDLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLWRAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVYDKTGQECVR--CGTIIEKIQLGGRGTHFCPNCQRRD
3TWK Chain:A ((2-279))-PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGKNLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGYISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSS-----------QFPSNWIFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLY


General information:
TITO was launched using:
RESULT:

Template: 3TWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1333 34831 26.13 133.96
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 26.13
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_3TWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TWK-query.scw
PDB file : Tito_Scwrl_3TWK.pdb: