Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLKDYIATIENYPKEGITFRDISPLMADGNAYSYAVREIVQYATD---KKVDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELNGREKIGDYDYK--VLMHY
1ZN9 Chain:B ((8-179))-LVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKL--APVPFFSLLQY


General information:
TITO was launched using:
RESULT:

Template: 1ZN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 823 -25300 -30.74 -151.49
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -30.74
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1ZN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZN9-query.scw
PDB file : Tito_Scwrl_1ZN9.pdb: