Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLTLVRHGEAAPPVNGNDIKRPLTARGHAQAEQTATFLKDIV-KPNIFVVSPLLRAQETLAHIQTYFK-DVPVLLCDKIKPDDDAKEAIEWLSQI---PYESIVVVCHMNVVGHIAELLTHET-FNPFALAEARIYDQAVIANGLSTQKNSFIPTI
1UJC Chain:A ((1-154))MQVFIMRHGDAALDAA-SDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDES--GNGTFNWQMSPCN


General information:
TITO was launched using:
RESULT:

Template: 1UJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 793 -22986 -28.99 -155.31
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -28.99
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_1UJC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UJC-query.scw
PDB file : Tito_Scwrl_1UJC.pdb: