Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTVVRKNESLDDALRRFKRAVTKAGTLQETRKREFYEKPSVKRKRKSEVARKRKKF
5AJ3 Chain:U ((8-56))IARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRES---------


General information:
TITO was launched using:
RESULT:

Template: 5AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain U - contact count / total energy / energy per contact / energy per residue : 53 -1139 -21.48 -23.23
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain U : 0.84

3D Compatibility (PKB) : -21.48
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_5AJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJ3-query.scw
PDB file : Tito_Scwrl_5AJ3.pdb: