Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEWYKKIGLLATTGLALFGLGACSNYGKSADGTVTIEYFNQKKEMTKTLEEITRDFEKENPKIKVKVVNVPNAGEVLKTRVLAGDVPDVVNIYPQSIELQEWAKAGVFEDLS--------NKDYLKRVKNGYAEKYAVNEKVYNVPFTANAYGIYYNKDKFEELGL---KVPETWDEFEQLVKDIVAKGQTPFGIAGADAWTLNGYNQLAFATATGGGKEANQY--LRYSQPNAIKL-SDPIMKDDIKVMDILRINGSKQKNWEGAGYTDVIGAFARGDVLMTPNGSWAITAINEQKPNFKIGTFMIPGKEKGQSLTVGAG-DLAWSISATTKHPKEANAFVEYMTRPEVMQKYYDVDGSPTAIEGVKQAGEDSPLAGMTEYAFTDRHLVWLQQYWTSEADFHTLTMNYVLTGDKEGMVNDLNAFFNPMKADVD
4ZZA Chain:A ((9-327))---------------------------------VTLDFFQFKAEAADWFKQAAQEFEKENPDIRININ----------------RVPDVI-TFNGDYSFGTFAASGVFHDFTDDPLVSELNEGMVNIAKNLVQTSDPAKKRLYGLPFAGNASGYIYNKDLFRKVGLDPDNPPQTWDEFIAMLKKFRDAGINPVQATLADAWT----TQAPLASLAGTLVPESEYAALKSGDTTFKQIWTEPIEKE----IELFKYADSEK----GVTYQQGTQNFAKGTAAIIPLGTYAIPQITMVNKDIDLGFAQMPATNDASKQILTAGDDVILTMGANSRHKEQSMRFIRFLMSKKQLENYADAQSAITPLK---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1431 26235 18.33 91.09
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 18.33
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_4ZZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZZA-query.scw
PDB file : Tito_Scwrl_4ZZA.pdb: