Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKKTRQTLIGLLVLLLLSTGSYYIKQMPSAPNSPKTNLSQKKQASEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQYKNRKETGNGSTSWTPPGWHQVKNLKGSYTHAVDRGHLLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQNKRVR--YRVTLYYASNEDLVPSASQIEAKSSDGELEFNVLVPNVQKGLQLDYRTGEVTVTQ
5FGW Chain:A ((170-257))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLITGTRTQNVGNNDRKGGMQYIENKVLDHIKRNPKVHVYYKATPVYQGSE-LLPRAVLVSALSSDGFIDETVRVFNNVAGFNIDYQNG------


General information:
TITO was launched using:
RESULT:

Template: 5FGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 313 6769 21.62 78.70
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 21.62
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_5FGW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FGW-query.scw
PDB file : Tito_Scwrl_5FGW.pdb: