Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSNSSSQLKRGLKNRHIQLIAMGGAVGTGLFLGSAQVIQSAGPSIILGYAIVGLVAFLIMRQMGEMIVEEPVVGSFSYFAQKYWGRFPGFLSGWNYWVVYILVAMTELTAVAKYVHYWWPHIP-------AWVSVLFFFVLVTCLNLGNVKFYGESEFWLAIIKVAAVISMIVFGLYLLLTAGSDSIASFSNLWQHGGFFPHGFSGLFYMLAFLMFAFGGIELIGMTAAEAENPEKSIPQAINQVIFRILVFYVASLAIIMSLIPWNQLDLGGLDKSPFVMIFSQLGIG-WAAHLLNFIILTAALSVYNSGMYANSRMLYGLAVQGNAPKVFAKVSKQGVPTSAVIFSSILIFGCVLLNYFIPEEALSYLMYMAVAALVLNWAIIGFTHLKFKRSMKLENKIAKFPALFSPLSNYIVLTFIGMILYIMWTQGFEKSVIIIPIWIAFMFGLYTILS
5J4N Chain:A ((5-334))----ADAHKVGLI--PVTLMVSGNIMGSGVFLLPANLASTGGIAI-YGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVL---LNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWF--RGETYMAA----WNVSGL--GTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALR---VSASPF-GDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5J4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1793 -221288 -123.42 -687.23
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -123.42
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.390

(partial model without unconserved sides chains):
PDB file : Tito_5J4N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J4N-query.scw
PDB file : Tito_Scwrl_5J4N.pdb: