Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVMQLLPELNSGGVERGTLEIARALVAQGHQSLVVSNGGRLVSQLEAEGSTHLTLPIHKKSLSSLWQIRPLRQLIEEHQPDIVHVRSRVPAWLTHFALRKIPANKHPHLISTVHG-----------FYSVNRYSAIMTQAEKVIAVSDSVVKYITDHYKNCPPQDIVRIYRGIDPAAFPHNYQPSAQWFNQVFNDFPELENKFLLCLPGRITRLKGHESLIELMQKL-GEQYPQLHAVVVGGADVKKQTYLSELQNTIQSKGLADKITFVGHRSDIREWLAFSDIVLSLSNQAETFGRTALEALSVGTPVIGWNRGGVAEILSHVYPQGLVEAENEKALVERVKHHIEQPQ-----TVAPVTM----FSLKDMCDQTLELYQSVLK
5D00 Chain:A ((81-375))-----------------------------------------------------------------------IAEVAERENLDIIHAHYALPHAVCAY-LAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFA--IESSDRVTAVSSALAAETYDLIK--PEKKIETIYNFI-------KNTAAIKEKHGILPD-----EKVVIHV-SNFRKVKRVQDVIRVFRNIAGKTKAKL--LLVG--DGPEKSTACEL---IRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEK-ESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADL--


General information:
TITO was launched using:
RESULT:

Template: 5D00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1412 -36270 -25.69 -135.84
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -25.69
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_5D00.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D00-query.scw
PDB file : Tito_Scwrl_5D00.pdb: