Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRCLMDSKTTKLPAYSETLSIEGMTCASCVGRVEKALKKVENVEIANVNLATEKAVVYSNQPIQREALVKAVERAGYDVPKAAPVELSIEGMTCASCVARVEKALKKVEGVQNTTVNLATEQAWVQADPSVNVEDLIRAVKKAGYDAKASEKNQDEQLDKKASELDQLKKDL-IISIVLALPVFILEMCSHLIPAFHMWVMHTIGQYNSWLLQFVLTTLVLVFPGRRFYQKGIPALWRLAPDMNSLVAVGTLAAYSFSVVATFMPQVLPEGTVNVYFEAAAVIVSLILLGRYFEAKAKGRTSQAIQHLVGMQPKTARIQRNGQIVEVAVAEVVSGTIVEIRPGERVPVDGEVVEGHSYIDESMITGEPVPVEKIIGQQVVGGTVNQNGTLNIRATAVGSSSVLSQIIRMVEQAQGSKLPIQGLVDKVTMWFVPAVMLIAAITFLV--------WFIWGPEPALTFGLVNAVAVLIIACPCAMGLATPTSIMVGTGRGAELGVLFRKGEALQLLQEAQVVAVDKTGTLTEGKPTLTDFNVQSGFERNQVLTLVASVEAKSEHPIALAIVQAAESEGLNLLPVTAFNSITGSGIEAEVSGQKVQIGADRYMHELRLDTSSFQAIAAQLGEEGKTPLYVAIDQQLAAIIAVADPIKETTYAAIEALHQLGLKVAMITGDNRHTAQAIAKKLNIDEVVAEVLPEGKVDTVRQLQKQYGRLAFVGDGINDAPALAQADVGLAIGTGTDVAIEAADVVLMSGSLKGVPNAIALSKATMRNIRQNLFWAF-VYNVALIPIAAGALYPAFGVLLSPMFAAGAMALSSVFVLGNALRLKRFHAPVH
4UMW Chain:A ((124-730))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------RLKENLPLITLIVMMAI------SWGLEQFN----HPFGQ-----LAFIATTLVGLYPIARQALRLIKSGSYFA--IETLMSVAAIGALFIGATAE-----------------AAMVLLLFLIGERLEGWAASR----VSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEW---------IYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEAQVNGERVLICAAG-----KHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGL-EFKAGLLPEDKVKAVTKLN-QHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTT----LLGMTGLWLAVLADTGA----TVLVTANALRLLR------


General information:
TITO was launched using:
RESULT:

Template: 4UMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3197 -75088 -23.49 -126.62
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -23.49
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_4UMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UMW-query.scw
PDB file : Tito_Scwrl_4UMW.pdb: