Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKQTVQLEIISVNQTKTKIELVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKIESRSGSGFYVVAPLAPLALNELGPKLDRSIDPLWISRQSLEAEPNAFKPGCGWLPN-DWMPLESIRKALRSATRSEDDSLLGYSSPLGLSALRDLLARRAQSK-GIEANLNQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDLEAFKEAI-----EGYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDQSNLIVIEDDIFSDFEYT--PAPRLAALDNLSRVIFIGSFSKTLSASIRCGYIIAKPEWIDQIADLKIATSFSHNGLSAKILHTALTDGSYRKH----LDLLKVRLAQAMQETIAKLKSIRIEPWIEPKAGIFVWCRLPEGVDAEKIAQFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYI---YKTLAEALLQESLEKQV
1WST Chain:A ((47-411))--------------------------------------------------------------------------------------------------------------------------AGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPR-RDAMLEALEEYMPEGVE-WTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEE------


General information:
TITO was launched using:
RESULT:

Template: 1WST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1959 -11328 -5.78 -32.46
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -5.78
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1WST.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WST-query.scw
PDB file : Tito_Scwrl_1WST.pdb: