Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRLNKSETTRQHILDTSFELVLHKGFVGVGLQEILKACDVPKGSFYHYFASKEAFGCALLEQYMANYKVRMEQLWQHSEQSAHARLMALWQAWIDDPVHGSWAE------NCLIVKLAAEVSDLSEDMRQILNDGVHKLTQRLALLFKEGQQEGSIPKHIEPLKTAQVMYQLWLGAALLTKLSQ-----DKAHLHLALETTQQLLKPIEE
3QBM Chain:A ((3-196))----RKGQETRERVVAQAAALFNVSGYAGTAISDIMAATGLEKGGIYRHFESKEQLALAAFD-YAAE-KVR-ERFAVG--LAGHKHTVDTIIAFLD--VFRSYAERPPLVGGCPILNTAIESDDTNPMLRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIATMEGAVMLARILETATPLEHAYTHLATYITQQV------


General information:
TITO was launched using:
RESULT:

Template: 3QBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 711 -57898 -81.43 -316.38
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -81.43
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_3QBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QBM-query.scw
PDB file : Tito_Scwrl_3QBM.pdb: