Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAEEHALTSPEYIKHHLTNMTYGKMPDGTWKLAETAEEAHSMGFTAIHLDSMGWSIGLGVIFCLLFWIVARAANAGVPTKFQSAIEMIIEFVDSSVRDTFHGKSRLIAPLALTIFVWIFLMNLMDLIPVDWIPQVAAFVGA-NAFGMDPHHVYFKIVPSTDPNITLGMSLSVFVLILFYSIREKGVGGFVGELALNPFNPSNPVAKALLIPVNLILELVTFLARPISLALRLFGNMYAGELIFILI-----ALLPF-----WIQWALSVPWAIFHILVITLQAFIFMMLTIVYLSMASEKH
5ARH Chain:W ((78-222))------------------------------------------------------------------------------------------------------------------------------------------FIGSTNLLGLLPH----SFTPTTQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFL---PQGTPTP-----LIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYL-------


General information:
TITO was launched using:
RESULT:

Template: 5ARH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 489 -95747 -195.80 -714.53
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain W : 0.61

3D Compatibility (PKB) : -195.80
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_5ARH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ARH-query.scw
PDB file : Tito_Scwrl_5ARH.pdb: