Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTNLAHKQEEDNVITLHPSTAKKKERTAMSDKFDKGYVMSSR-LYRNEVKPFLGDAARNVYAELEEYIS-----GFN--KESDFV--SYSQLQGKKIEGLEEHVRKLSTATVRAGLKQLIEYGVISIVATNPKL-GNKYKLNEISLVEHFSNKSTSETKALQKLNSTTLETKAQGTLETKDTIDIIYRYLIIDNLFNSLRSNKPLENHFFVYQENKKQVFLEQQKLEAEEKAKAEKERKDKVRKLSFDEVIKLTKTTFANLCDLELWEQYVAFRSQKANTKLTKNALNVIYKDLKAWGFQGSNQSLKTAISGNYLGLFAPKQQNHGFVNQSQASTRMSEIQELIAKEEAGNEQYGF
4PQL Chain:A ((10-114))--------------------------------NYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEI---------LNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 245 9172 37.44 97.57
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 37.44
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_4PQL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PQL-query.scw
PDB file : Tito_Scwrl_4PQL.pdb: