Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPGSVFFDQQFSFHDGE--SGEKLFVILGWD--N--------GIAIVAKTTSQQHGRGTTFGCQPKDRFHNFYLPQNSCYFRKCTWVCLDEFYELNAVEVLQKRFSGLINPVCNLTNEMLRKLQDCALESDDLSGRQESIIRSSLV
5HJZ Chain:B ((3-115))MRRGEIWQVD-LDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKV--YPFQ--------VLLSATT-GLQVDCKAQAEQIRSIATERLL--------RPIGRVSAAELAQLDEALKLHL---------------


General information:
TITO was launched using:
RESULT:

Template: 5HJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 456 -33385 -73.21 -333.85
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -73.21
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_5HJZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HJZ-query.scw
PDB file : Tito_Scwrl_5HJZ.pdb: