Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTQRCGWCSDDPLYIAYHDEEWGKPEHDEARLFEMLCLEGQQAGLSWITVLKKRESYRQHFFNHPIADIAAFTDDFLETKLSDAGLIRHLGKLKAIRDNAIAWQALKAQVDDVSKWLWQFVDAAPQNNDVVDYRKAPAQTEL---SLKLSKTLKKNGFKFVGPTTCYAFMQAVGMVNDHENNCQFKAS
2JG6 Chain:A ((3-182))----ECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKD---LQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSK--


General information:
TITO was launched using:
RESULT:

Template: 2JG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 780 -57391 -73.58 -324.24
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -73.58
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_2JG6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JG6-query.scw
PDB file : Tito_Scwrl_2JG6.pdb: