Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMTEQKSALSLRYFLNLEESQDGFGLVTFGKKQFTRFLTPVISIAIIIWGLYLGFSGVGRYYVALGVFFLVMQGLMRYWLLPMMFKRQFVRYQFGKSEQGIDLY--QDYFEFYAAGRKQAVQYSEVQTFAKGKL-------TYMLELKNKTVIIVPKRAFAQASDQTIFENTFKK
4CHJ Chain:A ((63-146))--------------------------------------------------------------------------------------------------CNLKIDRPKNFMNLTFNQKVRPIQLDDIAAVLYG--SKMLRNPVVGFRLAS-SGRAIAFS-FKDITDAQCFVSFLDD


General information:
TITO was launched using:
RESULT:

Template: 4CHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 185 -443 -2.39 -6.92
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -2.39
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.255

(partial model without unconserved sides chains):
PDB file : Tito_4CHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CHJ-query.scw
PDB file : Tito_Scwrl_4CHJ.pdb: