Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQQQVKNEFPTLEDIHAAAERLDGLVVKTPFVFSETISKTLGAEMWLKFENLQFTASFKERGALNKLLSLSEQEKQHGVIAASAGNHAQGVAYHAQRTGVTATIVMPKSTPNVKVQRVREYGARVILHGQDFSEAAAEMHRVAQEESLTIIHPFDDAEIIAGQGTIALEMLEAVPDLDILVVPIGGGGLISGIAIAAKSINPKIKIIGVQSVVYPSMAKLLCNYQLAVSMGS--------TVAEGIAVKTPGELTTQIAKHFVDDIVVVTEDMIEEAIALLLNIEKTVCEGAGATGIAAIMSRSDLFLGHKVGVVLSGGNIDTRVMVSVLQRHLTRTGRMVRICVELSDNPGALARLTAIIAEQGGNIYELRHERFAATSRAKESAVSVDIELKSAPDLEPLIQAMQLEGYIVRKEEI
1V71 Chain:A ((8-313))----------PTYDDVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE----PEAGN---DGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGCLSFAAARAMKEKLKNKRIGIIISGGNVD------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1V71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1891 -110569 -58.47 -371.04
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -58.47
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_1V71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V71-query.scw
PDB file : Tito_Scwrl_1V71.pdb: