Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHLVLASSSPRRRELLQQLGLNFEIYSPDIDESVHEGELVHQYVERLAREKAQAVLNIFPDSVIIAADTSLGLDGQIIGKPDSKQHAFDIWKQLSGRWHDVFSGICI--ATQQHILSQVVQTQVEFASLTTQDMEDYWATGEPVGKAGAYAIQGIASQYIPKIQGSYSN-VVGLPLYEFSQLFKRVKT
4JHC Chain:A ((23-207))-PKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRR---


General information:
TITO was launched using:
RESULT:

Template: 4JHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 947 -55829 -58.95 -306.75
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -58.95
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_4JHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JHC-query.scw
PDB file : Tito_Scwrl_4JHC.pdb: