Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIFLPG--ASGSTTFWHPLIEKLPQQYRAKII----GY----PSFGDTPESLEVKSFEDLTNYVVNQIHDESVIIAQSMGGIFAVTAALQKPQLVKGLVLIATSGGINLEP-------FNVQDWREAYR---QAFLKYPDWFITTNANY----------------EEFLSDINIKTLLIWGDNDPVSPVQVGQYLNQKFENSTLYVVKGGDHQLAEKYADEVAVQIKNYLKGLM
2OCK Chain:A ((26-254))--VLLLPGMLGSGETDFG-PQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSNGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGY-DYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ---


General information:
TITO was launched using:
RESULT:

Template: 2OCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 970 26644 27.47 138.05
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 27.47
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_2OCK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OCK-query.scw
PDB file : Tito_Scwrl_2OCK.pdb: