Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIAIIGAGISGLMSALELVEQGCTISIFDQQQ-AGQAASWAGGGILSPMYPWRYVHAVNQLAQFGKASYQAWNQKLYPVTGIDFEIHDTGM--LIFDEEDFDVGLSYAEQHQEPIQRCEYLQRDALEQVNPHISEQFQEAIY------FPELSNIRNPRVLQSLISYLKQHPNVEFFEHAAVKKLIQQGDVIQALQTEDGRKHTADHFVITSGAWSHYWNSQLKLEIPVEPV-QGQMLLFKTPAHWLPTMCMNRVMYLIPRMDGHI-----VCGSSMAHRGFD-------------------------TSTDETTQHNILE----------ACLEMVPEL--------ADFP------IVHRWAGLRPSSPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYSPERLQNKILA
5HXW Chain:A ((40-454))--VVVVGAGILGIMTAINLVERGLSVVIVEKGNIAGEQSSRFYGQAIS----YKMPDETFLLHHLGKHRWREMNAKV----GIDTTYRTQGRVEVPLDEEDLVNVRKWIDERSKNVGSDIPFKTRIIE--GAELNQRLRGATTDWKIAGFEEDSGSFDPEVATFVMAEYAKKMGVRIYTQCAARGLETQAGVISDVVTEKGAIKTS-QVVVAGGVWSRLFMQNLNVDVPTLPAYQSQQLISGSPTAPGGNVALPGGIFFREQADGTYATSPRVIVAPVVKESFTYGYKYLPLLALPDFPVHISLNEQLINSFMQSTHWNLDEVSPFEQFRNMTALPDLPELNASLEKLKAEFPAFKESKLIDQWSGAMAIAPDENPIISEVKEYPGLVINTATGW-GMTESPVSAELTADLLLGKKPVLDPKPFSLYRF------


General information:
TITO was launched using:
RESULT:

Template: 5HXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1727 -27099 -15.69 -77.20
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -15.69
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.304

(partial model without unconserved sides chains):
PDB file : Tito_5HXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HXW-query.scw
PDB file : Tito_Scwrl_5HXW.pdb: