Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMQTSFHEGRTIGLLLTFIGGAMDSYTYIQYGAFASAQTGNIILSIIQAFDGEWLSVGKKVLSTLFFFLGILLTKYLIDYFRKKEKHFWRLFVLYYEAVIFFFVSLTPVHEHPALVTILIAFTASIQWVAFDKINGRAYTNLFTTGNLKGVATNLYDYCISKEKADFDRFFHYLSVVLAFIAGAIVLVFCHHLFGAHSILIVSILFLIMALTQTFHLWQFYHTNRFTI
5IRZ Chain:D ((372-434))-----------------------------------------------------GEILSVSGGVY---FFFRGI-------QYFLQRRPSLKSLFVDSYSEILFFVQSLF------MLVSVVLYFSQRKEYVA--------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 110 -21977 -199.79 -348.83
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.51

3D Compatibility (PKB) : -199.79
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.195

(partial model without unconserved sides chains):
PDB file : Tito_5IRZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IRZ-query.scw
PDB file : Tito_Scwrl_5IRZ.pdb: