Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLHKTRINADPQRSPPPAPANHIRSPVGSASSQSLAISPLSTKPVDIPSPERKPNSGVVTGVSISDGGAIWDRRAQCRAPTPPPSSITVERREEAGYGAMVAKGGKASSSLSKATAGRVGSQEDDVEGGDETSSEDEEDEEEDSDEEDDEGEEGGYYDGATSDQEEDDDVDTGDSTSDDEEDEDDASTSASSSSSGSSTAPVEIGSRRTRRKMQSGKKSTQRSLKAAKNTAVPSSASSGAQWCGGPGPAAQPIRTKVSREGDVNVKVIFAARSRHCFRRYVKEVMTRFGFRKATDFDMYCIDQYGDRVDIDTEEDFEQLLDAFTEAMGVVGKDSLVGSPDTHASPPPPSLEPLHHLYGANQSTGSCGMPAVGDGSSMSRHARERAMSFSASQNHTSSFYAAKSFSLSPRLDATIASSISAGSLVEDDGKSSGSVLRLYVRYSNAYYTEHRREFEQQMNHSLLYPQSMLSNGGSGAHPPPPPPQQQQLSLGSPSSKWRLQTDQLPSGHVSPGAVGSPLARNLLAFTTCSVGSGGGDGGAISSHDELNAVHGKSSDWAAASADSMSMQFNETLNSNLAKTLRLDEAEPLDWRRMSVLGKGSFGTVYEGITQDGKMLAVKVQELSLDDGEDAEAVKAVKAEINLMRSLKHKNIVTYYGCQTRVLPTGNQQMEVFLELCHGGSL-ASLRRKFVKAKEPFSISLVRSYTRQVLEGLAYLHAQNVVHRDIKSDNVLISAM-GEAKLADFGCSKRLGPATLQGMPGTLPPGAAPAAAAPSPQEAAVARAAMHQTVVGSPFFMAPEVL-REDGSYTGAADIWSVGCLVLEL-LGREPWDITGK---NIFQI-MFRISKEKGMPTGVPKKCPAILLDFFERCFQRDTKRRATAVELLEHEWLTCPDKALEEVPPSPLSQKESPAE
4BID Chain:A ((26-280))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLGKGTYGIVYAGRDLSNQV-RIAIKEIP---E--------LHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--------------------------EE-----------FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE------IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK----------------------


General information:
TITO was launched using:
RESULT:

Template: 4BID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1198 -5692 -4.75 -24.64
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -4.75
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_4BID.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BID-query.scw
PDB file : Tito_Scwrl_4BID.pdb: