Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceREKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVVDLINHY
5ITD Chain:B ((51-131))-EKLRDTADGTFLVRDAST----DYTLTLRKGGNNKLIKIF--------SDPLTFSSVVELINHY


General information:
TITO was launched using:
RESULT:

Template: 5ITD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 134 -20132 -150.24 -387.14
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.93

3D Compatibility (PKB) : -150.24
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.822

(partial model without unconserved sides chains):
PDB file : Tito_5ITD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ITD-query.scw
PDB file : Tito_Scwrl_5ITD.pdb: