Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAVDAMGGDYAPQAIVEGVNQALSDFSDIEVQLYGDEAKIKQYLTATERVSIIHTDEKIDSDDEPTRAIRNKKNASMVLAAKAVKDGEADAVLSAGNTGALLAAGFFIVGRIKNIDRPGLMSTLPTVDGKGFDMLDLGANAENTAQHLHQYAVLGSFYAKNVRGIAQPRVGLLNNGTESSKGDPLRKETYELLAADESLNFIGNVEARDLMNGVADVVVADGFTGNAVLKSIEGTAMGIMGLLKTAITGGGLRAKLGALLLKDSLRGLKKQLNYSDVGGAVLFGVKAPVVKTHGSSDAKAVYSTIRQIRTMLETDVVAQTAREFSGE
5GOE Chain:A ((207-289))---------------------------------------------------------------------------------------------------------------------------------------DVFVLVANSESTLMNTEKH-----FFHKVNERLSKPNIFILNNRWDASASEPEYMEDVRRQHMERCLHFL--VEELKVVNAL-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 197 -25680 -130.35 -342.39
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -130.35
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_5GOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GOE-query.scw
PDB file : Tito_Scwrl_5GOE.pdb: