Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKPEFLESAEFYNRRYHNFSSSVIVPMALLLVFLLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILVNHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQTAKSAIETGTSLAGQNLAYSLYQSYKSQGEENPQTKV-QAVAQVE--------------AQISQLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELSLLAQKILEAESGKKVQGNLLDKGKITASEDGVLHLNPETSDSSMVAEGTLLAQLYPSLEREGKAKLTAYLSSKDVARIKVGDSVRYTTTHDAGNQLFLDSTITSIDATATKTEKGNFFKIEAETNLTSEQAEKLRYGVEGRLQMITGKKSYLRYYLDQFLNKE
3VKG Chain:A ((1907-2227))-----------------------------------------------------------------------------------------------------------LINEKRDQLEEEQLHLNIG------------LKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM--VQDQQAAEIK--QKDARELQVQLDVRNKEIAVQKVKAYADL-------PLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRE-------TEQIKTESSKVKNKVDRSIALLDN--LNSERGR------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 256 22364 87.36 139.77
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 87.36
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_3VKG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VKG-query.scw
PDB file : Tito_Scwrl_3VKG.pdb: