Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRLEVYKNYQRLYDLRIAILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDDSKLIQKGSPFWS
4YV6 Chain:B ((172-235))----AYSEQNKTNKTLVTQLSINCLIISIDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYK--------------


General information:
TITO was launched using:
RESULT:

Template: 4YV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 173 -27059 -156.41 -422.79
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -156.41
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_4YV6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YV6-query.scw
PDB file : Tito_Scwrl_4YV6.pdb: