Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKRFLALVWLRCQIILSNKSILLQ-VLVPFAFTYFYKYLMETQGKVNDQQALVLLMMCLPF--SLALAVGSPITIILSEEKEKYNLQTLLLSGVKGSEYILSTMFLPFLLTFVIMGTTP----LILGVTI--VHTFNYITIVLLTSLSIILFYLLIGLTAKSQVVAQVISLPAMIL-----VAFLPMLSSLDKTVAKITDYSFMGLFTKFFTKWEGFSW-NE-------------------T-LIPNLTLLIWIVLLLTLITITIRKKKIS
5DO7 Chain:A ((365-647))-FSKLGVLLRRVTRNLVRNKLAVITRLLQNLIMGLFLLFFVLRVRSNVLKGAIQDRVGLLYQFVGATPYTGMLNAVNLFPVLRAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIISYFTFQKYCSEILVVNEFYGLNFTCAFTQGIQFIEKTCPGATSRFTMNFLILYSFIPALVILGIVVFKIRDH-


General information:
TITO was launched using:
RESULT:

Template: 5DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1068 -166627 -156.02 -709.05
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -156.02
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_5DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DO7-query.scw
PDB file : Tito_Scwrl_5DO7.pdb: