Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPE-LKELWPKKGDQLYIRL-EVDK-KDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERY------AEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
4Q7J Chain:D ((17-174))-----------------------------------------------------------------------------ETRPGSIVRGVVVAID-KDVVLVDAGL-KSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 411 -4486 -10.91 -30.11
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain D : 0.58

3D Compatibility (PKB) : -10.91
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.316

(partial model without unconserved sides chains):
PDB file : Tito_4Q7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q7J-query.scw
PDB file : Tito_Scwrl_4Q7J.pdb: