Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIQQQSAIIDSLTNELSLLCEQVAYLTQKLSGKSSEKSVCPFGQLNLFEEESPSEKDGDVPS
1U2U Chain:B ((1-29))--EVQALKKRVQALKARNYALKQKVQALRHK---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1U2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 14 -699 -49.93 -24.10
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -49.93
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_1U2U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U2U-query.scw
PDB file : Tito_Scwrl_1U2U.pdb: