Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWYNCKRFNPIIYKERKIFMRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPD--LIFHSSTNGIRIINTDDSDIEMVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFN-DQSLDFLMQAEGIEGVAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEIENKDNLIWHLHNTAHLYRQELFTE-FILFDQKGNTIRNFQNIFPKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQPKLKVLVMSNFDQYHAKFVAETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLIYLLNAMMFIRLDE
4R6I Chain:B ((4-476))-----------------MLTPISIEKEHIRLINLLHFINEQNRWFTIKELSDYLQVADKTVRKYLKLLEDEIPPSWNLLVQKGKGIYLKKPLNESLSFVESKILRKSLNLQICEELVFKK-NSMQSLAQKLHLQVGALYPIINQINYDI-QSSHLNIKKKPLEISGREQDVRVFMLRLYCNI-PNDYWPFPYINKQNITDLINKMEKILNVQMYTYSKHKLCVLFAITISRLLSGNTIDNVSGLILVNKNDDHYK---TVASITSELQNSFGVTLHETEISFLALALLLSLGNSIT---NK-T-LTSYKKTIMPLAKEITKGIEHKLQLGINYDESFLTYVVLIIK---KALDKNFIQYYNYNIKFIRHIKQRHPNTFNTIQECISNLNYTVYSH-----FDCYEISLLTMHFETQRML-FKNNPKKIYVYTSQGCIHREYISALLEKRYNGLIKIVRNTI---------DMEIDIIISN---------------EFPTERDFHEIKK--------


General information:
TITO was launched using:
RESULT:

Template: 4R6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1892 -54094 -28.59 -122.11
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -28.59
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_4R6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R6I-query.scw
PDB file : Tito_Scwrl_4R6I.pdb: