Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTARRAGWIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL
4ESJ Chain:B ((4-257))MELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFE----VADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKP---------WIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL


General information:
TITO was launched using:
RESULT:

Template: 4ESJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1098 -104991 -95.62 -435.65
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.98

3D Compatibility (PKB) : -95.62
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4ESJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ESJ-query.scw
PDB file : Tito_Scwrl_4ESJ.pdb: