Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQVKLKEGEPVDVAIRRFKRSCEKAGVLADVRKREFYEKPTQERKRKKAAAVKR-YQKKLARESVRTTRLY
5AJ3 Chain:U ((12-70))---VMVQEGN-VEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIYNMEMAR---------


General information:
TITO was launched using:
RESULT:

Template: 5AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain U - contact count / total energy / energy per contact / energy per residue : 47 -2368 -50.38 -40.83
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain U : 0.78

3D Compatibility (PKB) : -50.38
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.729

(partial model without unconserved sides chains):
PDB file : Tito_5AJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJ3-query.scw
PDB file : Tito_Scwrl_5AJ3.pdb: