Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFLSQIDEMLIGDLDLQFVMPWEFEDLNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNCFFKLVEYMLVVLESRSFTSLFSNCVEFYNTKYSNEYLTFFLNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQLQIIRVM
4JD9 Chain:E ((90-114))-----------------------------------------------------------TSIDYYRCVLTSKLIGPQRFDKAIQ-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 18 -4759 -264.36 -190.34
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain E : 0.51

3D Compatibility (PKB) : -264.36
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_4JD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JD9-query.scw
PDB file : Tito_Scwrl_4JD9.pdb: