Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMNMPVQHILQSVDWSKYSFEEWCRQLGAWLNGDTEIMVKIVKTMPTKRITQKQREKLIAMYMSDENLKDRLCTRRKGTCCQLNDNEARALHRLIIDIKLIEDHILQDWISAIWSHHVMGNSLRDIAQSNDTSVNQIRQDLKCGLAYIKSRNPQFKFETFEKTA
4CXF Chain:A ((140-185))-----------------------------------------------------------------------------------------------------------TGSREVIVLTAIVGMSQPEAAAVLGLSVKAVEGRIGRARAKLSALL------------


General information:
TITO was launched using:
RESULT:

Template: 4CXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 135 -13511 -100.08 -293.72
target 2D structure prediction score : 0.93
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -100.08
2D Compatibility (Sec. Struct. Predict.) : 0.93
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_4CXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CXF-query.scw
PDB file : Tito_Scwrl_4CXF.pdb: