Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKYSNINSFNALQTLTVGSSNYQIFSLTQAEKKLGDIAKLPKSLKVLLENLLRFEDQHSVKTEHIYALAEWLKTRTSDQEIQYRPARVLMQDFTGVPAVVDLAAMRAAMAQAGGDPEKINPLSPVDLVIDHSVMVDHFADDQ-AFEENVQIEMQRNGERYQFLRWGQSAFNNFSVVPPGTGICHQVNLEYLAQAVWLGEDNGQTFAFPDTL-VGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPISMLIPEVIGFKLTGKLQEGITATDLVLTITQMLRQKGVVGKFVEFYGDGLADLPLADRATIANMAPEYGATCGFFPIDEVTLGYLKLTGRQSDRIALVEAYSKAQGLWRNAGDEPVFTDTLSLDMSTVQASLAGPKRPQDRVLLSEVPKTFNALMELTLKPAKEAKERLENEGGGGTAVEATKANIQHESPSCVIEGQEYPLNHGDVVISAITSCTNTSNPSVMLAAGLLAKKAIEKGLQRKPWVKSSLAPGSKVVTDYLLAAGLTPYLDELGYNLVGYGCTTCIGNSGPLPEPIEDAIQCHDLNVASVLSGNRNFEGRVHPLVKTN-WLASPPLVVAYGLVGNIRTDLTTQPIGQGKDGQPVYLKDIWPSQAEIDAVLQKVNTDMFHKEYAAVFDGDESWQAIQI-PKSKTYEWADDSTYIRHPPFFEGIGEPPKPIKNIEQARILAVLGDSVTTDHISPAGNIKKDSLAGRYLQEQGVEPKDFNSYGSRRGNHEVMMRGTFANIRIKNEMLGG-----EEGGNTIHVPSGEKLA-IYDAAMRYQHEHTPLVIIAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFVDGQTRQSLNLTGHEVISIRGLSDGIQPHEILEVDVKGPNGVASHFNVLCRIDTLNE--VEYFKAGGILHYVLRNLIAS
1ACO Chain:A ((62-746))---------------------------------------------------------------------------------LRLRPDRVAMQDATAQMAMLQFIS--------SGLPK---------VAVPSTIHCDHLIEAQLGGEKDLRRAKDINQEVYNFLATAGAKYG-VGFWRPGSGIIHQIILE--------------NYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGR-ADIANLADEFK--DHLVPDSGCH--YDQLIEINLSELKPHINGPFTPD------------------LAHPVAEVGSVAEKEG--------------------------WPL---DIRVGLIGSCTNSSYEDMGRSAA-VAKQALAHGLKCKS--QFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWD------RKDIKKGEKNTI-VTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFL-TGKDGKKFKLEA--PDADELPRAEFDPGQDTYQHP-----PKDSSGQRVDVSPTSQRLQLLE--------PFDKWDG------KDLEDLQILIKVKGKCTTDHISAAGPWLK-------------------------------FRGHLDN--ISNNLLIGAINSENRKANSVRNAVTQEFGPVPDTARYYKQHGIRWVVIGDENYGEGSSREHSALEPRFLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPV--DKLTIQGLKD-FAPGKPLTCIIKHPNGTQE---TILLNHTFNETQIEWFRAGSALN---------


General information:
TITO was launched using:
RESULT:

Template: 1ACO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4445 84327 18.97 125.30
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 18.97
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_1ACO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ACO-query.scw
PDB file : Tito_Scwrl_1ACO.pdb: