Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDALRIALVGNPNCGKTSLFNHLTGTRQKVANYAGVTVERKVGHFQLPSGRSVRVLDLPGAYSLNATSPDEAITRDVCLGKIAEEGQQDAFLCVVDATNLKLHLGLVLEMIELGRPILLVLNMMDEARRRGIQINTQKLSQRLGVPVVETVAVRNAGIENLLHALDQEKYSVPQTELSGLTGTHHQKIDMIFKDVVHYVDQEDKRTDFLDRIFLHPVLGLLSLAIMMFIVFQAVFAWAAPFMDGIEGFFGWLGEVVGSVITQPLLHSLVVDGIIAGAGGVVVFLPQILILFFFILVLEESGYLPRAAFLLDKLMFQAGLSGRAFIPLLSSFACAVPGIMATRSISDPRDRFTTIMVAPLMTCSARLPVYALLIAAFIPEKMVWGIFNLQGLVLFGLYMAGIVSALCVSFLMKFFQKDKSQHALLLELPSYRFPDLKSVGIGLLDRAKIFLKRVGGIIFALSILLWFLCTFPQPPEGATLPAIDYSFAGMLGHLIQPLFAPVGFNWQICIALIPAMAAREVVVAALGTVYALSATDEDAVAQGLSHLISADGTGWSLATGLSLLVWFIYAPHCLATLATVRRETGSWKHVAAMTAYLFGLAYFASFVTYQIASHYWG
3B1Y Chain:A ((5-156))-----EIALIGNPNSGKTSLFNLITGHNQRVGNWPGVAVERKSGLVK--KNKDLEIQDLPGIYSMSPYSPEEKVARDYLLSQRA-----DSILNVVDATNLERNLYLTTQLIETGIPVTIALNMIDVLD----KINVDKLSYHLGVPVVATSALKQTGVDQVVK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 751 -108433 -144.38 -732.66
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -144.38
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_3B1Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B1Y-query.scw
PDB file : Tito_Scwrl_3B1Y.pdb: