Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQPHAEVFAL---RQAGEQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAQLNQGFLKAMSSGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIETVIADDCQLNVRPLHNVDIETVAQPKRVILDRRGRLPLTAKIL----ENPETVMVMGPYRQELADLGVIQLEIQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMFNADFEYMAQQLRFKLLDVTQLDQDIRLRLIPTQEKV
2HXV Chain:A ((15-356))-------ETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEKFRNHGIEVIEGVLEEEVKKLCEFFITYVTKKRPFVALKYASTLDGKIADHRGDSKWIT-DKLRFKVHEMRNIYSAVLVGAGTVLKDNPQLTCR------LKEGRNPVRVILDRKG--VLSGKVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYER-DIDSVLVEGGSKVFSEFLDHA--DVVFGFYSTKIFGKGL-DVFSGYLSDVSVPPKFKVVNVEFSDSEFLVEMRP-----


General information:
TITO was launched using:
RESULT:

Template: 2HXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1875 -5352 -2.85 -15.98
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -2.85
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_2HXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HXV-query.scw
PDB file : Tito_Scwrl_2HXV.pdb: