Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQFAVIGNPIEQSRSPELHHAFAEKTGVDLNYQKRLAPLDGFESSMRSFFAEGGSGMNVTVPFKEQAFALCNVLTERAQIAKAVNTL-WMENGKLHGDNTDGQGLVAAIQALEWNLENTTILILGAGGATRGVIYPLVQAGAKKIVIANRTLARAEQLVDDLKTAVPQAQLQAISLNDLE-GDFDIVINATSASLSGDALQL-PEKLKFKYA-YEMAY--GKPSSFLDQAKQRNVP-YAEGFGMLVGQAIEAFSIWNGVRPQLKDFL
1P74 Chain:A ((4-258))----YAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQ---PYGNIQAVSMDSIPLQTYDLVINATSAG-----ASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMP------


General information:
TITO was launched using:
RESULT:

Template: 1P74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1312 -65355 -49.81 -268.95
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -49.81
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1P74.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P74-query.scw
PDB file : Tito_Scwrl_1P74.pdb: