Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSQLYASLFYQKDVTEIFSDSSLITYMIQVEVALAQAQAQVGVIPQNAANTIAQVAEHALDKFDFSALAVATSLAGNIAIPFVKQLTAIVKDIDEDASRYVHWGATSQDILDTACILQCRDALNMVEGQLQQCYATALQQAKQYRHQVMIGRTWLQQALPITLGHKLARWASAFKRDLDRIQAMKSRVLTAQLGGAVGSLASLQDQGSLVVSAFAKQLNL-TVPTSTWHGERDRIVEIASVLGMIVGNTGKMARDWSLMMQTEIAELFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQSMVQEHERSLGAWHAEWLAVPEIFQLCAGALTRTGEVLQGFEVNAEHMQQNLECTNGLIMAEAVMMTLAPK-IGRLNAHHLVEAACKTAVAQNQHLFDVVSQLDEVKGQFSQEEIRNIFKPENYLGNIQQQIDAVLKEAQGESK
2PFM Chain:A ((12-437))------SRYTRPEMGAIWTEENKFKAWLEVEILACEAWAELGDIPKE---DVKKIREHA--SFDIDRIYEIEKETRHDVVAFTRAVSETPALGEE--RKWVHYGLTSTDVVDTALSYILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGLWYEEMKRNVERFKQAANTVRVGKLSGAVGTYANID---PFVEKYVCENLGLEAAPISTQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQKSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYENVPLWHERDISHSSAERVILPDATIALNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEADERITSKLTQEEINECFNYEHHM----QHVDTIFE-------


General information:
TITO was launched using:
RESULT:

Template: 2PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1926 -72658 -37.72 -171.36
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -37.72
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_2PFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PFM-query.scw
PDB file : Tito_Scwrl_2PFM.pdb: