Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIAAQVIKNKSEQAIFTISPEATVLEAIT-IMAEKGIGALVVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVGFISIGDLVKAAMEDQKVLIEQLKQYISG
5G5X Chain:A ((8-109))---------------VVTVTPEMTVSEVIDLILKTKHLGFPVV-EGERLVGIITLHDII-GVEPEER------VGNIMSREVVAVSPNQSAFEAFKIMSEMGIGRLPVVEHGRVVGIVSRSDLMR-------------------


General information:
TITO was launched using:
RESULT:

Template: 5G5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 434 -57898 -133.40 -573.24
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -133.40
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_5G5X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G5X-query.scw
PDB file : Tito_Scwrl_5G5X.pdb: